Screencast: Multi-dimesional exploration of P-D interactions

Learn how to interactively explore P-D interactions as a graph (in Cytoscape) and as peaks from ChIP-chip/seq data in context of the genome and the transcriptome structure (TSSs, TTSs, etc.) (no audio.)

Screencast: E. coli transcriptome structure

We import tiling array data for the E. coli transcriptome into the genome browser. Our data source is a GEO entry and we make use of GGB's R interoperability to work with the data. You can follow along with detailed instructions.